ENSDARG00000010400


Danio rerio

Features
Gene ID: ENSDARG00000010400
  
Biological name :lrrfip2
  
Synonyms : leucine rich repeat (in FLII) interacting protein 2 / lrrfip2
  
Possible biological names infered from orthology : LRR binding FLII interacting protein 2 / Q9Y608
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 42621205
Gene end: 42674001
  
Corresponding Affymetrix probe sets: Dr.5861.1.A1_at (Zebrafish Array)   NM_199479_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000135819
Ensembl peptide - ENSDARP00000090502
Ensembl peptide - ENSDARP00000090511
Ensembl peptide - ENSDARP00000122794
Ensembl peptide - ENSDARP00000123994
NCBI entrez gene - 335838     See in Manteia.
RefSeq - NM_001034974
RefSeq - NM_199479
RefSeq Peptide - NP_001030146
RefSeq Peptide - NP_955773
swissprot - F8W449
swissprot - A0A0R4IMS4
swissprot - F6NRL4
swissprot - Q4V969
swissprot - Q6PGV0
ZFIN ID - ZDB-GENE-030131-7781
Ensembl - ENSDARG00000010400
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRRFIP2ENSGALG00000033102Gallus gallus
 Q9Y608ENSG00000093167Homo sapiens
 Lrrfip2ENSMUSG00000032497Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lrrfip1b / leucine rich repeat (in FLII) interacting protein 1b / Q3UZ39* / Q32MZ4* / LRRFIP1* / LRR binding FLII interacting protein 1* / leucine rich repeat (in FLII) interacting protein 1*ENSDARG0000009517055
lrrfip1a / leucine rich repeat (in FLII) interacting protein 1a / Q3UZ39* / Q32MZ4* / LRRFIP1* / LRR binding FLII interacting protein 1* / leucine rich repeat (in FLII) interacting protein 1*ENSDARG0000003001237


Protein motifs (from Interpro)
Interpro ID Name
 IPR019139  Leucine-rich repeat flightless-interacting protein 1/2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr