ENSDARG00000030012


Danio rerio

Features
Gene ID: ENSDARG00000030012
  
Biological name :lrrfip1a
  
Synonyms : leucine rich repeat (in FLII) interacting protein 1a / lrrfip1a
  
Possible biological names infered from orthology : leucine rich repeat (in FLII) interacting protein 1 / LRR binding FLII interacting protein 1 / LRRFIP1 / Q32MZ4 / Q3UZ39
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 24065855
Gene end: 24115589
  
Corresponding Affymetrix probe sets: Dr.20533.1.A1_at (Zebrafish Array)   Dr.8629.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000125310
Ensembl peptide - ENSDARP00000140884
Ensembl peptide - ENSDARP00000139087
Ensembl peptide - ENSDARP00000135757
Ensembl peptide - ENSDARP00000132482
Ensembl peptide - ENSDARP00000012027
Ensembl peptide - ENSDARP00000028695
Ensembl peptide - ENSDARP00000074141
Ensembl peptide - ENSDARP00000092350
Ensembl peptide - ENSDARP00000111467
NCBI entrez gene - 407677     See in Manteia.
RefSeq - XM_005167636
RefSeq - XM_021478942
swissprot - A0A0R4IL11
swissprot - A0A0R4IBX6
swissprot - F1QDT9
swissprot - F1QGV4
swissprot - F1QI65
swissprot - G1K2J1
swissprot - H0WEN2
swissprot - H1A5Y8
swissprot - A0A0R4IXG0
swissprot - A0A0R4IUM2
ZFIN ID - ZDB-GENE-030131-99
Ensembl - ENSDARG00000030012
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000003862Gallus gallus
 Q32MZ4ENSG00000124831Homo sapiens
 Q3UZ39ENSMUSG00000026305Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lrrfip1b / leucine rich repeat (in FLII) interacting protein 1b / Q3UZ39* / Q32MZ4* / LRRFIP1* / LRR binding FLII interacting protein 1* / leucine rich repeat (in FLII) interacting protein 1*ENSDARG0000009517020
lrrfip2 / leucine rich repeat (in FLII) interacting protein 2 / Q9Y608* / LRR binding FLII interacting protein 2*ENSDARG0000001040013


Protein motifs (from Interpro)
Interpro ID Name
 IPR019139  Leucine-rich repeat flightless-interacting protein 1/2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr