ENSDARG00000010524


Danio rerio

Features
Gene ID: ENSDARG00000010524
  
Biological name :si:ch211-282j22.3
  
Synonyms : si:ch211-282j22.3
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 13762409
Gene end: 13784859
  
Corresponding Affymetrix probe sets: Dr.13071.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000002926
NCBI entrez gene - 562939     See in Manteia.
swissprot - E7F7X8
ZFIN ID - ZDB-GENE-091113-49
Ensembl - ENSDARG00000010524
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
edem3 / ER degradation enhancer, mannosidase alpha-like 3 / Q9BZQ6* / ER degradation enhancing alpha-mannosidase like protein 3*ENSDARG0000007412956
edem2 / ER degradation enhancer, mannosidase alpha-like 2 / Q9BV94* / ER degradation enhancing alpha-mannosidase like protein 2*ENSDARG0000002844826
edem1 / ER degradation enhancer, mannosidase alpha-like 1 / Q925U4* / Q92611* / ER degradation enhancing alpha-mannosidase like protein 1*ENSDARG0000002509425


Protein motifs (from Interpro)
Interpro ID Name
 IPR001382  Glycoside hydrolase family 47
 IPR003137  PA domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006491 N-glycan processing IBA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0030968 endoplasmic reticulum unfolded protein response IBA
 biological_processGO:0097466 ubiquitin-dependent glycoprotein ERAD pathway IBA
 biological_processGO:1904382 mannose trimming involved in glycoprotein ERAD pathway IEA
 cellular_componentGO:0005783 endoplasmic reticulum IBA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IBA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016798 hydrolase activity, acting on glycosyl bonds IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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