ENSDARG00000028448


Danio rerio

Features
Gene ID: ENSDARG00000028448
  
Biological name :edem2
  
Synonyms : edem2 / ER degradation enhancer, mannosidase alpha-like 2
  
Possible biological names infered from orthology : ER degradation enhancing alpha-mannosidase like protein 2 / Q9BV94
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 6948941
Gene end: 6982986
  
Corresponding Affymetrix probe sets: Dr.12700.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000125108
Ensembl peptide - ENSDARP00000130442
Ensembl peptide - ENSDARP00000037677
NCBI entrez gene - 402801     See in Manteia.
swissprot - A0A0R4IAP0
swissprot - F1R301
swissprot - F8W5G1
ZFIN ID - ZDB-GENE-060519-1
Ensembl - ENSDARG00000028448
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EDEM2ENSGALG00000003128Gallus gallus
 EDEM2ENSG00000088298Homo sapiens
 Edem2ENSMUSG00000038312Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-282j22.3ENSDARG0000001052439
edem3 / ER degradation enhancer, mannosidase alpha-like 3 / Q9BZQ6* / ER degradation enhancing alpha-mannosidase like protein 3*ENSDARG0000007412939
edem1 / ER degradation enhancer, mannosidase alpha-like 1 / Q925U4* / Q92611* / ER degradation enhancing alpha-mannosidase like protein 1*ENSDARG0000002509437


Protein motifs (from Interpro)
Interpro ID Name
 IPR001382  Glycoside hydrolase family 47


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006491 N-glycan processing IBA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0030968 endoplasmic reticulum unfolded protein response IBA
 biological_processGO:0097466 ubiquitin-dependent glycoprotein ERAD pathway IBA
 cellular_componentGO:0005783 endoplasmic reticulum IBA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016798 hydrolase activity, acting on glycosyl bonds IEA


Pathways (from Reactome)
Pathway description
ER Quality Control Compartment (ERQC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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