ENSDARG00000011573


Danio rerio

Features
Gene ID: ENSDARG00000011573
  
Biological name :abcb11a
  
Synonyms : abcb11a / ATP-binding cassette, sub-family B (MDR/TAP), member 11a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 48755638
Gene end: 48817119
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000047400
Ensembl peptide - ENSDARP00000118702
NCBI entrez gene - 797269     See in Manteia.
RefSeq - XM_009304974
swissprot - F1QSX6
swissprot - F6NLY2
ZFIN ID - ZDB-GENE-050517-13
Ensembl - ENSDARG00000011573
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
abcb11b / ATP-binding cassette, sub-family B (MDR/TAP), member 11b / ABCB11* / O95342* / Q9QY30* / ATP binding cassette subfamily B member 11* / ATP-binding cassette, sub-family B (MDR/TAP)...ENSDARG0000007007870
abcb5 / ATP-binding cassette, sub-family B (MDR/TAP), member 5ENSDARG0000002178749
abcb4 / ATP-binding cassette, sub-family B (MDR/TAP), member 4 / ABCB1* / P08183* / Abcb1b* / P21447* / P21440* / Abcb1a* / P21439* / P06795* / Multidrug resistance protein 1A * / Phosphati...ENSDARG0000001093649


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR011527  ABC transporter type 1, transmembrane domain
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015722 canalicular bile acid transport IBA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0015126 canalicular bile acid transmembrane transporter activity IBA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr