ENSDARG00000011921


Danio rerio

Features
Gene ID: ENSDARG00000011921
  
Biological name :txnl1
  
Synonyms : thioredoxin-like 1 / txnl1
  
Possible biological names infered from orthology : O43396 / Q8CDN6
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 917593
Gene end: 929448
  
Corresponding Affymetrix probe sets: Dr.18739.1.S1_at (Zebrafish Array)   NM_201138_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000114555
Ensembl peptide - ENSDARP00000023934
NCBI entrez gene - 394113     See in Manteia.
RefSeq - NM_201138
RefSeq Peptide - NP_957432
swissprot - B8A5D4
ZFIN ID - ZDB-GENE-040426-701
Ensembl - ENSDARG00000011921
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TXNL1ENSGALG00000033862Gallus gallus
 TXNL1ENSG00000091164Homo sapiens
 Txnl1ENSMUSG00000024583Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
txn / thioredoxin / Txn1* / Q6A555* / Q86VQ3* / TXNDC8* / P10599* / P10639* / Q69AB2* / TXNDC2* / thioredoxin 1* / thioredoxin domain containing 2* / thioredoxin domain containing 8* / thio...ENSDARG0000004412516
zgc:56493 / TXN* / Txn1* / Q6A555* / Q86VQ3* / P10639* / Q69AB2* / TXNDC2* / TXNDC8* / P10599* / thioredoxin* / thioredoxin 1* / thioredoxin domain containing 2* / thioredoxin domain contai...ENSDARG0000003143515


Protein motifs (from Interpro)
Interpro ID Name
 IPR008979  Galactose-binding-like domain superfamily
 IPR010400  PITH domain
 IPR012336  Thioredoxin-like fold
 IPR013766  Thioredoxin domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0034599 cellular response to oxidative stress IBA
 biological_processGO:0045454 cell redox homeostasis IBA
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:0098869 cellular oxidant detoxification IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004791 thioredoxin-disulfide reductase activity IBA
 molecular_functionGO:0015035 protein disulfide oxidoreductase activity IBA
 molecular_functionGO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IBA
 molecular_functionGO:0047134 protein-disulfide reductase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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