ENSDARG00000012025


Danio rerio

Features
Gene ID: ENSDARG00000012025
  
Biological name :hs6st2
  
Synonyms : heparan sulfate 6-O-sulfotransferase 2 / hs6st2 / Q800H9
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 31081862
Gene end: 31087830
  
Corresponding Affymetrix probe sets: Dr.2500.1.S1_at (Zebrafish Array)   NM_194421_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000022497
NCBI entrez gene - 378450     See in Manteia.
RefSeq - NM_194421
RefSeq Peptide - NP_919402
swissprot - Q800H9
ZFIN ID - ZDB-GENE-030909-14
Ensembl - ENSDARG00000012025
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000034146Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hs6st3a / heparan sulfate 6-O-sulfotransferase 3aENSDARG0000007121751
Q56UJ5 / hs6st1a / heparan sulfate 6-O-sulfotransferase 1a / HS6ST1* / O60243* / Q9QYK5* / heparan sulfate 6-O-sulfotransferase 1*ENSDARG0000005475449
A0MGZ5 / hs6st1b / heparan sulfate 6-O-sulfotransferase 1b / Q9QYK5* / HS6ST1* / O60243* / heparan sulfate 6-O-sulfotransferase 1*ENSDARG0000007150148
hs6st3b / heparan sulfate 6-O-sulfotransferase 3b / Q9QYK4* / HS6ST2* / HS6ST3* / Q8IZP7* / Q96MM7* / Q80UW0* / heparan sulfate 6-O-sulfotransferase 3* / heparan sulfate 6-O-sulfotransferase 2*ENSDARG0000006950034


Protein motifs (from Interpro)
Interpro ID Name
 IPR005331  Sulfotransferase
 IPR010635  Heparan sulphate 6-sulfotransferase/Protein-tyrosine sulfotransferase
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IEA
 biological_processGO:0001569 branching involved in blood vessel morphogenesis IMP
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007517 muscle organ development IEA
 biological_processGO:0015015 heparan sulfate proteoglycan biosynthetic process, enzymatic modification IBA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0048048 embryonic eye morphogenesis IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008146 sulfotransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0017095 heparan sulfate 6-O-sulfotransferase activity IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001285 intersegmental vessel intersegmental vessel decreased amount , abnormal
Show

 ZFA:0001286 caudal vein plexus caudal vein plexus malformed , abnormal
caudal vein plexus perforate , abnormal
Show

 ZFA:0005035 subintestinal vein subintestinal vein malformed , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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