ENSDARG00000054754


Danio rerio

Features
Gene ID: ENSDARG00000054754
  
Biological name :hs6st1a
  
Synonyms : heparan sulfate 6-O-sulfotransferase 1a / hs6st1a / Q56UJ5
  
Possible biological names infered from orthology : heparan sulfate 6-O-sulfotransferase 1 / HS6ST1 / O60243 / Q9QYK5
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 40901997
Gene end: 41124013
  
Corresponding Affymetrix probe sets: Dr.12882.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000119653
Ensembl peptide - ENSDARP00000145279
swissprot - B0S6C9
swissprot - Q56UJ5
ZFIN ID - ZDB-GENE-050524-1
Ensembl - ENSDARG00000054754
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HS6ST1ENSGALG00000002155Gallus gallus
 HS6ST1ENSG00000136720Homo sapiens
 Hs6st1ENSMUSG00000045216Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A0MGZ5 / hs6st1b / heparan sulfate 6-O-sulfotransferase 1b / Q9QYK5* / HS6ST1* / O60243* / heparan sulfate 6-O-sulfotransferase 1*ENSDARG0000007150183
hs6st3a / heparan sulfate 6-O-sulfotransferase 3aENSDARG0000007121758
hs6st2 / Q800H9 / heparan sulfate 6-O-sulfotransferase 2ENSDARG0000001202556
hs6st3b / heparan sulfate 6-O-sulfotransferase 3b / Q9QYK4* / HS6ST2* / HS6ST3* / Q8IZP7* / Q96MM7* / Q80UW0* / heparan sulfate 6-O-sulfotransferase 3* / heparan sulfate 6-O-sulfotransferase 2*ENSDARG0000006950041


Protein motifs (from Interpro)
Interpro ID Name
 IPR005331  Sulfotransferase
 IPR010635  Heparan sulphate 6-sulfotransferase/Protein-tyrosine sulfotransferase
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015015 heparan sulfate proteoglycan biosynthetic process, enzymatic modification IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008146 sulfotransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0017095 heparan sulfate 6-O-sulfotransferase activity IMP


Pathways (from Reactome)
Pathway description
HS-GAG biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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