ENSDARG00000013476


Danio rerio

Features
Gene ID: ENSDARG00000013476
  
Biological name :arhgef39
  
Synonyms : arhgef39 / Rho guanine nucleotide exchange factor (GEF) 39
  
Possible biological names infered from orthology : Q66JY6 / Q8N4T4 / Rho guanine nucleotide exchange factor 39
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 12401146
Gene end: 12477278
  
Corresponding Affymetrix probe sets: Dr.15091.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000125437
Ensembl peptide - ENSDARP00000153387
Ensembl peptide - ENSDARP00000012708
Ensembl peptide - ENSDARP00000109555
NCBI entrez gene - 492469     See in Manteia.
RefSeq - NM_001007341
RefSeq Peptide - NP_001007342
swissprot - B0R089
swissprot - F1QG07
swissprot - H0WF06
ZFIN ID - ZDB-GENE-041114-28
Ensembl - ENSDARG00000013476
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ARHGEF39ENSGALG00000002599Gallus gallus
 Q8N4T4ENSG00000137135Homo sapiens
 Q66JY6ENSMUSG00000051517Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000219  Dbl homology (DH) domain
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0035023 regulation of Rho protein signal transduction IEA
 biological_processGO:0065009 regulation of molecular function IEA
 molecular_functionGO:0005089 Rho guanyl-nucleotide exchange factor activity IEA


Pathways (from Reactome)
Pathway description
NRAGE signals death through JNK
Rho GTPase cycle
G alpha (12/13) signalling events


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr