ENSDARG00000013961


Danio rerio

Features
Gene ID: ENSDARG00000013961
  
Biological name :slc31a1
  
Synonyms : slc31a1 / solute carrier family 31 (copper transporter), member 1
  
Possible biological names infered from orthology : O15431 / Q8K211 / solute carrier family 31 member 1
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 57328535
Gene end: 57354915
  
Corresponding Affymetrix probe sets: Dr.6847.1.S1_a_at (Zebrafish Array)   Dr.6847.2.S1_at (Zebrafish Array)   NM_205717_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000015824
Ensembl peptide - ENSDARP00000123985
NCBI entrez gene - 403028     See in Manteia.
RefSeq - NM_001320405
RefSeq - NM_205717
RefSeq Peptide - NP_001307334
RefSeq Peptide - NP_991280
swissprot - F1QKH1
ZFIN ID - ZDB-GENE-040415-3
Ensembl - ENSDARG00000013961
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC31A1ENSGALG00000008844Gallus gallus
 O15431ENSG00000136868Homo sapiens
 Q8K211ENSMUSG00000066150Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc31a2 / solute carrier family 31 (copper transporter), member 2 / O15432* / Q9CPU9* / solute carrier family 31 member 2*ENSDARG0000007609221


Protein motifs (from Interpro)
Interpro ID Name
 IPR007274  Ctr copper transporter


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006825 copper ion transport ISS
 biological_processGO:0035434 copper ion transmembrane transport IEA
 biological_processGO:0042539 hypotonic salinity response IDA
 biological_processGO:0046688 response to copper ion IDA
 biological_processGO:0071391 cellular response to estrogen stimulus IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005375 copper ion transmembrane transporter activity ISS


Pathways (from Reactome)
Pathway description
Metal ion SLC transporters


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr