ENSDARG00000014091


Danio rerio

Features
Gene ID: ENSDARG00000014091
  
Biological name :osr1
  
Synonyms : odd-skipped related transciption factor 1 / osr1 / Q5XJQ7
  
Possible biological names infered from orthology : Protein odd-skipped-related 1 / Q8TAX0 / Q9WVG7
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 32144370
Gene end: 32150443
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000146147
Ensembl peptide - ENSDARP00000023564
NCBI entrez gene - 450059     See in Manteia.
RefSeq - NM_001006079
RefSeq Peptide - NP_001006079
swissprot - B2GQ48
swissprot - Q5XJQ7
ZFIN ID - ZDB-GENE-070321-1
Ensembl - ENSDARG00000014091
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 OSR1ENSGALG00000016473Gallus gallus
 OSR1ENSG00000143867Homo sapiens
 Osr1ENSMUSG00000048387Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
osr2 / odd-skipped related transciption factor 2 / Q8N2R0*ENSDARG0000003800657


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IMP
 biological_processGO:0001822 kidney development IMP
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0033339 pectoral fin development IMP
 biological_processGO:0035775 pronephric glomerulus morphogenesis IMP
 biological_processGO:0035776 pronephric proximal tubule development IMP
 biological_processGO:0035777 pronephric distal tubule development IMP
 biological_processGO:0035778 pronephric nephron tubule epithelial cell differentiation IMP
 biological_processGO:0035779 angioblast cell differentiation IMP
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IMP
 biological_processGO:0048382 mesendoderm development IMP
 biological_processGO:0048389 intermediate mesoderm development IMP
 biological_processGO:0048793 pronephros development IEA
 biological_processGO:0072112 glomerular visceral epithelial cell differentiation IMP
 biological_processGO:1900107 regulation of nodal signaling pathway IMP
 biological_processGO:1903224 regulation of endodermal cell differentiation IMP
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000017 endoderm endoderm morphology , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000117 hypoblast hypoblast has fewer parts of type endodermal cell , abnormal
hypoblast has extra parts of type endodermal cell , abnormal
Show

 ZFA:0000150 pronephric duct pronephric duct anterior region amount , ameliorated
pronephric duct anterior region absent , abnormal
Show

 ZFA:0000151 pronephros pronephros decreased size , abnormal
pronephros cystic , abnormal
pronephros morphology , abnormal
Show

 ZFA:0000186 common cardinal vein common cardinal vein increased diameter , abnormal
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 ZFA:0000416 presumptive endoderm presumptive endoderm increased width , abnormal
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 ZFA:0001104 pharyngeal endoderm pharyngeal endoderm increased width , abnormal
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 ZFA:0001161 pectoral fin pectoral fin decreased size , abnormal
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 ZFA:0001206 intermediate mesoderm intermediate mesoderm morphology , abnormal
intermediate mesoderm anterior region absent , abnormal
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 ZFA:0001286 caudal vein plexus caudal vein plexus dilated , abnormal
Show

 ZFA:0001557 pronephric glomerulus pronephric glomerulus aplastic , abnormal
Show

 ZFA:0001558 pronephric tubule pronephric tubule morphology , abnormal
pronephric tubule aplastic , abnormal
pronephric tubule decreased diameter , abnormal
Show

 ZFA:0001620 pronephric proximal convoluted tubule pronephric proximal convoluted tubule morphology , abnormal
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 ZFA:0001673 pronephric podocyte pronephric podocyte absent , abnormal
pronephric podocyte mislocalised , abnormal
pronephric podocyte morphology , abnormal
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 ZFA:0005039 anterior lateral mesoderm anterior lateral mesoderm morphology , abnormal
Show

 ZFA:0005041 anterior lateral plate mesoderm anterior lateral plate mesoderm morphology , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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