ENSDARG00000015201


Danio rerio

Features
Gene ID: ENSDARG00000015201
  
Biological name :pcmt
  
Synonyms : pcmt / protein-L-isoaspartate (D-aspartate) O-methyltransferase
  
Possible biological names infered from orthology : P22061 / PCMT1 / protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 1293988
Gene end: 1314537
  
Corresponding Affymetrix probe sets: Dr.19446.1.S1_at (Zebrafish Array)   Dr.19446.2.S1_a_at (Zebrafish Array)   Dr.19446.2.S1_x_at (Zebrafish Array)   Dr.372.1.S1_at (Zebrafish Array)   NM_131465_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000119861
Ensembl peptide - ENSDARP00000126988
NCBI entrez gene - 30751     See in Manteia.
RefSeq - NM_131465
RefSeq Peptide - NP_571540
swissprot - Q5RFW4
swissprot - R4GES5
ZFIN ID - ZDB-GENE-990415-134
Ensembl - ENSDARG00000015201
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PCMT1ENSGALG00000012388Gallus gallus
 PCMT1ENSG00000120265Homo sapiens
 Pcmt1ENSMUSG00000019795Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pcmtl / l-isoaspartyl protein carboxyl methyltransferase, likeENSDARG0000004284859


Protein motifs (from Interpro)
Interpro ID Name
 IPR000682  Protein-L-isoaspartate(D-aspartate) O-methyltransferase
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006464 cellular protein modification process IEA
 biological_processGO:0006479 protein methylation IEA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Protein repair


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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