ENSDARG00000015394


Danio rerio

Features
Gene ID: ENSDARG00000015394
  
Biological name :thoc7
  
Synonyms : Q6DGZ3 / thoc7 / THO complex 7
  
Possible biological names infered from orthology : Q6I9Y2 / Q7TMY4 / THO complex subunit 7 homolog
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 19603251
Gene end: 19611356
  
Corresponding Affymetrix probe sets: Dr.730.1.A1_at (Zebrafish Array)   NM_001003429_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000022217
NCBI entrez gene - 445035     See in Manteia.
RefSeq - NM_001003429
RefSeq Peptide - NP_001003429
swissprot - Q6DGZ3
ZFIN ID - ZDB-GENE-040801-17
Ensembl - ENSDARG00000015394
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 THOC7ENSGALG00000007299Gallus gallus
 THOC7ENSG00000163634Homo sapiens
 Thoc7ENSMUSG00000053453Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008501  THO complex subunit 7/Mft1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0006406 mRNA export from nucleus IBA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0051028 mRNA transport IEA
 cellular_componentGO:0000445 THO complex part of transcription export complex IEA
 cellular_componentGO:0000781 chromosome, telomeric region IBA
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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