ENSMUSG00000053453


Mus musculus

Features
Gene ID: ENSMUSG00000053453
  
Biological name :Thoc7
  
Synonyms : Q7TMY4 / Thoc7 / THO complex subunit 7 homolog
  
Possible biological names infered from orthology : Q6I9Y2 / THO complex 7
  
Species: Mus musculus
  
Chr. number: 14
Strand: -1
Band: A1
Gene start: 13949012
Gene end: 13961852
  
Corresponding Affymetrix probe sets: 10417676 (MoGene1.0st)   1448461_a_at (Mouse Genome 430 2.0 Array)   1453621_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000153560
Ensembl peptide - ENSMUSP00000065819
Ensembl peptide - ENSMUSP00000153618
Ensembl peptide - ENSMUSP00000152983
Ensembl peptide - ENSMUSP00000153276
Ensembl peptide - ENSMUSP00000153123
NCBI entrez gene - 66231     See in Manteia.
MGI - MGI:1913481
RefSeq - XM_006518077
RefSeq - XM_006518076
RefSeq - XM_017316119
RefSeq - XM_011244769
RefSeq - XM_006518078
RefSeq - NM_001285780
RefSeq - NM_025435
RefSeq - XM_017316120
RefSeq Peptide - NP_079711
RefSeq Peptide - NP_001272709
swissprot - Q7TMY4
swissprot - A0A286YEA7
swissprot - A0A286YCS0
swissprot - A0A286YCW5
swissprot - A0A286YD48
swissprot - A0A286YDT0
Ensembl - ENSMUSG00000053453
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 thoc7ENSDARG00000015394Danio rerio
 THOC7ENSGALG00000007299Gallus gallus
 THOC7ENSG00000163634Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008501  THO complex subunit 7/Mft1
 IPR027421  DNA polymerase lambda lyase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0006406 mRNA export from nucleus IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0046784 viral mRNA export from host cell nucleus IEA
 biological_processGO:0051028 mRNA transport IEA
 cellular_componentGO:0000346 transcription export complex IEA
 cellular_componentGO:0000347 THO complex IEA
 cellular_componentGO:0000445 THO complex part of transcription export complex IEA
 cellular_componentGO:0000781 chromosome, telomeric region IBA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016607 nuclear speck ISO
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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