ENSDARG00000015425


Danio rerio

Features
Gene ID: ENSDARG00000015425
  
Biological name :slc24a4a
  
Synonyms : slc24a4a / solute carrier family 24 (sodium/potassium/calcium exchanger), member 4a
  
Possible biological names infered from orthology : Q8NFF2 / SLC24A4 / solute carrier family 24 member 4 / solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 38784362
Gene end: 38887424
  
Corresponding Affymetrix probe sets: Dr.12707.1.A1_at (Zebrafish Array)   NM_001017770_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000113532
NCBI entrez gene - 550467     See in Manteia.
RefSeq - NM_001017770
RefSeq Peptide - NP_001017770
swissprot - F1RAZ0
ZFIN ID - ZDB-GENE-050417-291
Ensembl - ENSDARG00000015425
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC24A4ENSGALG00000010793Gallus gallus
 Q8NFF2ENSG00000140090Homo sapiens
 Slc24a4ENSMUSG00000041771Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc24a4b / solute carrier family 24 (sodium/potassium/calcium exchanger), member 4b / Q8NFF2* / SLC24A4* / solute carrier family 24 member 4* / solute carrier family 24 (sodium/potassium/ca...ENSDARG0000006750975
slc24a3 / solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 / Q99PD7* / Q9HC58* / solute carrier family 24 member 3*ENSDARG0000000676053
si:ch73-335m24.5ENSDARG0000003638350
LO018380.1ENSDARG0000004108649
slc24a2 / solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 / Q9UI40* / solute carrier family 24 member 2*ENSDARG0000004298835
slc24a5 / solute carrier family 24 (sodium/potassium/calcium exchanger), member 5 / Q71RS6* / Q8C261* / solute carrier family 24 member 5*ENSDARG0000002477134
slc24a1 / solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 / O60721* / solute carrier family 24 member 1*ENSDARG0000004143133
CABZ01081780.1 / Q9UI40* / SLC24A2* / solute carrier family 24 member 2* / solute carrier family 24 (sodium/potassium/calcium exchanger), member 2*ENSDARG0000006315833
slc8b1 / solute carrier family 8 (sodium/lithium/calcium exchanger), member B1 / Q6J4K2* / Q925Q3* / solute carrier family 8 member B1*ENSDARG000001055847


Protein motifs (from Interpro)
Interpro ID Name
 IPR004481  Sodium/potassium/calcium exchanger
 IPR004837  Sodium/calcium exchanger membrane region
 IPR030232  Sodium/potassium/calcium exchanger 4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006874 cellular calcium ion homeostasis IBA
 biological_processGO:0007608 sensory perception of smell IBA
 biological_processGO:0035725 sodium ion transmembrane transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005262 calcium channel activity IBA
 molecular_functionGO:0005509 calcium ion binding IBA
 molecular_functionGO:0008273 calcium, potassium:sodium antiporter activity IBA
 molecular_functionGO:0030955 potassium ion binding IBA
 molecular_functionGO:0031402 sodium ion binding IBA


Pathways (from Reactome)
Pathway description
Sodium/Calcium exchangers


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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