ENSDARG00000015734


Danio rerio

Features
Gene ID: ENSDARG00000015734
  
Biological name :aicda
  
Synonyms : activation-induced cytidine deaminase / aicda
  
Possible biological names infered from orthology : Q9GZX7 / Q9WVE0 / Single-stranded DNA cytosine deaminase
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 12660477
Gene end: 12665652
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000011293
NCBI entrez gene - 493784     See in Manteia.
RefSeq - NM_001008403
RefSeq Peptide - NP_001008403
swissprot - B3DGZ0
ZFIN ID - ZDB-GENE-041122-2
Ensembl - ENSDARG00000015734
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AICDAENSGALG00000014280Gallus gallus
 AICDAENSG00000111732Homo sapiens
 AicdaENSMUSG00000040627Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
apobec2b / apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2b / Q9Y235* / APOBEC2* / apolipoprotein B mRNA editing enzyme catalytic subunit 2*ENSDARG0000011399230
apobec2a / apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a / Q9Y235* / Q9WV35* / APOBEC2* / apolipoprotein B mRNA editing enzyme catalytic subunit 2* / apolipoprotein B ...ENSDARG0000001888129


Protein motifs (from Interpro)
Interpro ID Name
 IPR002125  Cytidine and deoxycytidylate deaminase domain
 IPR013158  APOBEC-like, N-terminal
 IPR016192  APOBEC/CMP deaminase, zinc-binding
 IPR016193  Cytidine deaminase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009972 cytidine deamination IEA
 biological_processGO:0016444 somatic cell DNA recombination IDA
 cellular_componentGO:0005634 nucleus ISS
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004126 cytidine deaminase activity ISS
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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