ENSDARG00000015747


Danio rerio

Features
Gene ID: ENSDARG00000015747
  
Biological name :aarsd1
  
Synonyms : aarsd1 / alanyl-tRNA synthetase domain containing 1
  
Possible biological names infered from orthology : Q3THG9 / Q9BTE6
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 6049355
Gene end: 6063328
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000011878
NCBI entrez gene - 445178     See in Manteia.
RefSeq - NM_001003572
RefSeq Peptide - NP_001003572
swissprot - F1QPA7
ZFIN ID - ZDB-GENE-040801-91
Ensembl - ENSDARG00000015747
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AARSD1ENSGALG00000002880Gallus gallus
 AARSD1ENSG00000266967Homo sapiens
 Aarsd1ENSMUSG00000075528Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ptges3a / prostaglandin E synthase 3a (cytosolic) / PTGES3* / Q9R0Q7* / Q15185* / prostaglandin E synthase 3*ENSDARG000000372844
ptges3b / prostaglandin E synthase 3b (cytosolic) / PTGES3* / Q9R0Q7* / Q15185* / prostaglandin E synthase 3*ENSDARG000000896263
si:ch211-131k2.3ENSDARG000000794623


Protein motifs (from Interpro)
Interpro ID Name
 IPR009000  Translation protein, beta-barrel domain superfamily
 IPR012947  Threonyl/alanyl tRNA synthetase, SAD
 IPR018163  Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0043039 tRNA aminoacylation IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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