ENSGALG00000002880


Gallus gallus

Features
Gene ID: ENSGALG00000002880
  
Biological name :AARSD1
  
Synonyms : AARSD1 / Gallus gallus alanyl-tRNA synthetase domain containing 1 (AARSD1), mRNA.
  
Possible biological names infered from orthology : alanyl-tRNA synthetase domain containing 1 / Q3THG9 / Q9BTE6
  
Species: Gallus gallus
  
Chr. number: 27
Strand: -1
Band:
Gene start: 5511314
Gene end: 5515677
  
Corresponding Affymetrix probe sets: Gga.5572.1.S1_a_at (Chicken Array)   Gga.5572.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000004532
NCBI entrez gene - 107049007     See in Manteia.
RefSeq - NM_001328355
RefSeq - XM_015299626
RefSeq Peptide - NP_001315284
swissprot - F1NC49
Ensembl - ENSGALG00000002880
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 aarsd1ENSDARG00000015747Danio rerio
 AARSD1ENSG00000266967Homo sapiens
 Aarsd1ENSMUSG00000075528Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PTGES3 / prostaglandin E synthase 3 / Q15185* / Q9R0Q7*ENSGALG000000368374
PTGES3L / Gallus gallus prostaglandin E synthase 3 (cytosolic)-like (PTGES3L), mRNA.ENSGALG000000381293


Protein motifs (from Interpro)
Interpro ID Name
 IPR009000  Translation protein, beta-barrel domain superfamily
 IPR012947  Threonyl/alanyl tRNA synthetase, SAD
 IPR018163  Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily
 IPR018165  Alanyl-tRNA synthetase, class IIc, core domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006419 alanyl-tRNA aminoacylation IEA
 biological_processGO:0006450 regulation of translational fidelity IEA
 biological_processGO:0043039 tRNA aminoacylation IEA
 biological_processGO:0106074 aminoacyl-tRNA metabolism involved in translational fidelity IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0002161 aminoacyl-tRNA editing activity IEA
 molecular_functionGO:0002196 Ser-tRNA(Ala) hydrolase activity IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004813 alanine-tRNA ligase activity IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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