ENSDARG00000015749


Danio rerio

Features
Gene ID: ENSDARG00000015749
  
Biological name :hps3
  
Synonyms : Hermansky-Pudlak syndrome 3 / hps3
  
Possible biological names infered from orthology : Hermansky-Pudlak syndrome 3 protein homolog / HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 / Q91VB4 / Q969F9
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 38202614
Gene end: 38224321
  
Corresponding Affymetrix probe sets: Dr.10978.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000121267
Ensembl peptide - ENSDARP00000141228
NCBI entrez gene - 777758     See in Manteia.
RefSeq - NM_001193542
RefSeq Peptide - NP_001180471
swissprot - F1R654
swissprot - A0A0R4IZE2
ZFIN ID - ZDB-GENE-061110-115
Ensembl - ENSDARG00000015749
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HPS3ENSGALG00000040089Gallus gallus
 HPS3ENSG00000163755Homo sapiens
 Hps3ENSMUSG00000027615Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR028167  Hermansky-Pudlak syndrome 3, central region
 IPR029437  Hermansky-Pudlak syndrome 3 protein, N-terminal domain
 IPR029438  Hermansky-Pudlak syndrome 3 protein, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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