ENSDARG00000015823


Danio rerio

Features
Gene ID: ENSDARG00000015823
  
Biological name :vps26b
  
Synonyms : Q7ZV03 / vps26b / VPS26 retromer complex component B
  
Possible biological names infered from orthology : Q4G0F5 / Q8C0E2
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 19324697
Gene end: 19331078
  
Corresponding Affymetrix probe sets: Dr.4181.1.S1_at (Zebrafish Array)   NM_213375_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000020396
Ensembl peptide - ENSDARP00000124835
NCBI entrez gene - 406684     See in Manteia.
RefSeq - NM_213375
RefSeq Peptide - NP_998540
swissprot - F8W269
swissprot - Q7ZV03
ZFIN ID - ZDB-GENE-040426-2699
Ensembl - ENSDARG00000015823
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VPS26BENSGALG00000001521Gallus gallus
 Q4G0F5ENSG00000151502Homo sapiens
 Q8C0E2ENSMUSG00000031988Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
vps26bl / vacuolar protein sorting 26 homolog B, like / Q8C0E2* / VPS26B* / Q4G0F5* / VPS26, retromer complex component B*ENSDARG0000005543391
Q6TNP8 / vps26a / vacuolar protein sorting 26 homolog A (S. pombe) / O75436* / P40336* / VPS26, retromer complex component A*ENSDARG0000005654967


Protein motifs (from Interpro)
Interpro ID Name
 IPR028934  Vacuolar protein sorting protein 26 related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0042147 retrograde transport, endosome to Golgi IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030904 retromer complex IBA
 molecular_functionGO:0008565 protein transporter activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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