ENSDARG00000015978


Danio rerio

Features
Gene ID: ENSDARG00000015978
  
Biological name :COX5B
  
Synonyms : COX5B / zgc:86599
  
Possible biological names infered from orthology : cytochrome c oxidase subunit 5B / Gm11273 / P10606
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 42374770
Gene end: 42378524
  
Corresponding Affymetrix probe sets: Dr.1452.1.S1_at (Zebrafish Array)   NM_001002163_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000116544
Ensembl peptide - ENSDARP00000016376
NCBI entrez gene - 415253     See in Manteia.
RefSeq - NM_001002163
RefSeq Peptide - NP_001002163
swissprot - F1RCH5
swissprot - F1R1J3
ZFIN ID - ZDB-GENE-040625-180
Ensembl - ENSDARG00000015978
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 COX5BENSG00000135940Homo sapiens
 Cox5bENSMUSG00000061518Mus musculus
 Gm11273ENSMUSG00000079941Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CABZ01070469.1 / COX5B* / P10606* / cytochrome c oxidase subunit 5B*ENSDARG0000011325475
cox5b2 / cytochrome c oxidase subunit Vb 2 / COX5B* / P10606* / cytochrome c oxidase subunit 5B*ENSDARG0000006873864


Protein motifs (from Interpro)
Interpro ID Name
 IPR002124  Cytochrome c oxidase, subunit Vb
 IPR020893  Cytochrome c oxidase, subunit Vb, zinc binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006123 mitochondrial electron transport, cytochrome c to oxygen IBA
 biological_processGO:0022900 electron transport chain IEA
 biological_processGO:0042776 mitochondrial ATP synthesis coupled proton transport IBA
 biological_processGO:1902600 proton transmembrane transport IEA
 cellular_componentGO:0005740 mitochondrial envelope IEA
 cellular_componentGO:0005751 mitochondrial respiratory chain complex IV IBA
 molecular_functionGO:0004129 cytochrome-c oxidase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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