ENSMUSG00000061518


Mus musculus

Features
Gene ID: ENSMUSG00000061518
  
Biological name :Cox5b
  
Synonyms : Cox5b
  
Possible biological names infered from orthology : cytochrome c oxidase subunit 5B / P10606
  
Species: Mus musculus
  
Chr. number: 1
Strand: 1
Band: B
Gene start: 36691449
Gene end: 36693681
  
Corresponding Affymetrix probe sets: 10345504 (MoGene1.0st)   10408044 (MoGene1.0st)   1416902_a_at (Mouse Genome 430 2.0 Array)   1435613_x_at (Mouse Genome 430 2.0 Array)   1436149_at (Mouse Genome 430 2.0 Array)   1454716_x_at (Mouse Genome 430 2.0 Array)   1456588_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000141224
Ensembl peptide - ENSMUSP00000141554
Ensembl peptide - ENSMUSP00000079944
NCBI entrez gene - 12859     See in Manteia.
MGI - MGI:88475
RefSeq - NM_009942
RefSeq Peptide - NP_034072
swissprot - Q9D881
swissprot - A0A0A6YVR0
swissprot - F7C106
Ensembl - ENSMUSG00000061518
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01070469.1ENSDARG00000113254Danio rerio
 COX5BENSDARG00000015978Danio rerio
 cox5b2ENSDARG00000068738Danio rerio
 COX5BENSG00000135940Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm11273 / COX5B* / P10606* / cytochrome c oxidase subunit 5B*ENSMUSG00000079941100


Protein motifs (from Interpro)
Interpro ID Name
 IPR002124  Cytochrome c oxidase, subunit Vb
 IPR020893  Cytochrome c oxidase, subunit Vb, zinc binding site
 IPR036972  Cytochrome c oxidase, subunit Vb superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0022900 electron transport chain IEA
 biological_processGO:1902600 proton transmembrane transport IEA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005740 mitochondrial envelope IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0004129 cytochrome-c oxidase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000603 pale liver "liver lacking normal coloration, often refers to bloodless condition" [J:18048]
Show

Allelic Composition: Coq6tm1b(EUCOMM)Hmgu/Coq6+
Genetic Background: C57BL/6N-Coq6tm1b(EUCOMM)Hmgu/J

 MP:0001415 increased exploration in new environment "greater amount of time spent investigating new location" [J:28825]
Show

Allelic Composition: Cecr2tm2b(EUCOMM)Hmgu/Cecr2+
Genetic Background: C57BL/6N-Cecr2tm2b(EUCOMM)Hmgu/Tcp

 MP:0003717 pallor "an unnatural paleness to the skin, generally attributable to anemia" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Coq6tm1b(EUCOMM)Hmgu/Coq6+
Genetic Background: C57BL/6N-Coq6tm1b(EUCOMM)Hmgu/J

 MP:0004576 abnormal foot plate morphology "any structural anomaly of the distal elements of the developing limb of vertebrates that will give rise to the pedal appendages (e.g. hand, foot, paw)" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Coq6tm1b(EUCOMM)Hmgu/Coq6+
Genetic Background: C57BL/6N-Coq6tm1b(EUCOMM)Hmgu/J

 MP:0004848 abnormal liver size "anomaly in the average size of the liver " [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Coq6tm1b(EUCOMM)Hmgu/Coq6+
Genetic Background: C57BL/6N-Coq6tm1b(EUCOMM)Hmgu/J

 MP:0005566 decreased blood urea nitrogen level "low circulating concentration of nitrogen, in the form of urea; commonly used to measure renal function" [RGD:Rat Genome Database submission, Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Cecr2tm2b(EUCOMM)Hmgu/Cecr2+
Genetic Background: C57BL/6N-Cecr2tm2b(EUCOMM)Hmgu/Tcp

 MP:0011100 complete preweaning lethality "death of all organisms of a given genotype in a population between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Coq6tm1b(EUCOMM)Hmgu/Coq6+
Genetic Background: C57BL/6N-Coq6tm1b(EUCOMM)Hmgu/J

 MP:0011239 abnormal skin coloration "a variation in an expected skin color or complexion that may be due to inflammation, pigment defects or other causes" [MGI:llw2]
Show

Allelic Composition: Cecr2tm2b(EUCOMM)Hmgu/Cecr2+
Genetic Background: C57BL/6N-Cecr2tm2b(EUCOMM)Hmgu/Tcp

 MP:0013294 prenatal lethality prior to heart atrial septation "death prior to the completion of heart atrial septation (Mus: E14.5-15.5)" [MGI:smb]
Show

Allelic Composition: Coq6tm1b(EUCOMM)Hmgu/Coq6+
Genetic Background: C57BL/6N-Coq6tm1b(EUCOMM)Hmgu/J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr