ENSDARG00000016112


Danio rerio

Features
Gene ID: ENSDARG00000016112
  
Biological name :bbs12
  
Synonyms : Bardet-Biedl syndrome 12 / bbs12
  
Possible biological names infered from orthology : Bardet-Biedl syndrome 12 protein homolog / Q5SUD9 / Q6ZW61
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 1351214
Gene end: 1366544
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000012805
Ensembl peptide - ENSDARP00000152249
NCBI entrez gene - 570583     See in Manteia.
swissprot - F1QBF1
ZFIN ID - ZDB-GENE-070626-3
Ensembl - ENSDARG00000016112
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BBS12ENSG00000181004Homo sapiens
 Bbs12ENSMUSG00000051444Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002423  Chaperonin Cpn60/TCP-1 family
 IPR027409  GroEL-like apical domain superfamily
 IPR027413  GroEL-like equatorial domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006458 "de novo" protein folding IBA
 biological_processGO:0007369 gastrulation IMP
 biological_processGO:0060027 convergent extension involved in gastrulation IMP
 biological_processGO:0061077 chaperone-mediated protein folding IBA
 cellular_componentGO:0005832 chaperonin-containing T-complex IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0044183 protein binding involved in protein folding IBA
 molecular_functionGO:0051082 unfolded protein binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000135 notochord notochord kinked , abnormal
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 ZFA:0000155 somite somite increased width , abnormal
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 ZFA:0001094 whole organism whole organism anterior-posterior axis decreased length , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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