ENSDARG00000016212


Danio rerio

Features
Gene ID: ENSDARG00000016212
  
Biological name :nup214
  
Synonyms : nucleoporin 214 / nup214
  
Possible biological names infered from orthology : Nuclear pore complex protein Nup214 / P35658 / Q80U93
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 71924175
Gene end: 71948555
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000102382
Ensembl peptide - ENSDARP00000133289
swissprot - A0A0H2UKK7
swissprot - E7F5M0
ZFIN ID - ZDB-GENE-110203-3
Ensembl - ENSDARG00000016212
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NUP214ENSGALG00000041111Gallus gallus
 NUP214ENSG00000126883Homo sapiens
 Nup214ENSMUSG00000001855Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR026054  Nuclear pore complex protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006405 RNA export from nucleus IBA
 biological_processGO:0006606 protein import into nucleus IBA
 cellular_componentGO:0044613 nuclear pore central transport channel IBA
 cellular_componentGO:0044615 nuclear pore nuclear basket IBA
 molecular_functionGO:0008139 nuclear localization sequence binding IBA
 molecular_functionGO:0017056 structural constituent of nuclear pore IBA


Pathways (from Reactome)
Pathway description
Transport of Mature mRNA derived from an Intron-Containing Transcript
Regulation of Glucokinase by Glucokinase Regulatory Protein
snRNP Assembly
SUMOylation of DNA damage response and repair proteins
SUMOylation of ubiquitinylation proteins
Nuclear Pore Complex (NPC) Disassembly
SUMOylation of SUMOylation proteins
HuR (ELAVL1) binds and stabilizes mRNA
SUMOylation of chromatin organization proteins
SUMOylation of RNA binding proteins
Transcriptional regulation by small RNAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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