Manteia

ENSMUSG00000001855

Mus musculus

Features

Gene ID:	ENSMUSG00000001855

Biological name :	Nup214

Synonyms :	Nuclear pore complex protein Nup214 / Nup214 / Q80U93

Possible biological names infered from orthology :	nucleoporin 214 / P35658

Species:	Mus musculus

Chr. number:	2
Strand:	1
Band:	B
Gene start:	31974436
Gene end:	32053975

Corresponding Affymetrix probe sets:	10471256 (MoGene1.0st) 1434351_at (Mouse Genome 430 2.0 Array) 1456503_at (Mouse Genome 430 2.0 Array)

Cross references:	Ensembl peptide - ENSMUSP00000066492 Ensembl peptide - ENSMUSP00000142255 Ensembl peptide - ENSMUSP00000141436 Ensembl peptide - ENSMUSP00000115665 NCBI entrez gene - 227720 See in Manteia. MGI - MGI:1095411 RefSeq - XM_006497945 RefSeq - XM_017317375 RefSeq - XM_006497946 RefSeq - NM_172268 RefSeq Peptide - NP_758472 swissprot - Q80U93 swissprot - A2ATN3 swissprot - A0A0A6YW83 swissprot - A0A0A6YY32 Ensembl - ENSMUSG00000001855

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Paralog prediction (from Ensembl)

Paralog name

Similarity(%)

No match

Protein motifs (from Interpro)

Interpro ID	Name
IPR001680	WD40 repeat
IPR015943	WD40/YVTN repeat-like-containing domain superfamily
IPR026054	Nuclear pore complex protein

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0006406	mRNA export from nucleus	IEA
biological_process	GO:0006606	protein import into nucleus	IMP
biological_process	GO:0006611	protein export from nucleus	IEA
biological_process	GO:0015031	protein transport	IEA
biological_process	GO:0046822	regulation of nucleocytoplasmic transport	IEA
biological_process	GO:0051028	mRNA transport	IEA
biological_process	GO:0051726	regulation of cell cycle	IMP
cellular_component	GO:0005634	nucleus	ISO
cellular_component	GO:0005643	nuclear pore	IEA
cellular_component	GO:0005925	focal adhesion	IEA
cellular_component	GO:0043231	intracellular membrane-bounded organelle	IEA
cellular_component	GO:0044613	nuclear pore central transport channel	IBA
cellular_component	GO:0044615	nuclear pore nuclear basket	IBA
cellular_component	GO:1990876	cytoplasmic side of nuclear pore	IEA
molecular_function	GO:0005049	nuclear export signal receptor activity	IEA
molecular_function	GO:0005515	protein binding	IEA
molecular_function	GO:0008139	nuclear localization sequence binding	IBA
molecular_function	GO:0017056	structural constituent of nuclear pore	IBA

Pathways (from Reactome)

Pathway description

Phenotype (from MGI, Zfin or HPO)

ID	Phenotype	Definition	Genetic BG
MP:0004963	abnormal blastocoele morphology	"any structural anomaly the fluid-filled cavity of the blastocyst of the preimplantation embryo of mammals" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]	Show Allelic Composition: L1cam^tm1.1Vlem/L1cam^tm1.1Vlem Genetic Background: B6.Cg-L1cam^tm1.1Vlem
MP:0011094	complete embryonic lethality before implantation	"death of all organisms of a given genotype in a population between fertilization and implantation (Mus: E0 to less than E4.5)" [MGI:csmith]	Show Allelic Composition: L1cam^tm1.1Vlem/L1cam^tm1.1Vlem Genetic Background: B6.Cg-L1cam^tm1.1Vlem

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr