ENSDARG00000016391


Danio rerio

Features
Gene ID: ENSDARG00000016391
  
Biological name :calcoco1b
  
Synonyms : calcium binding and coiled-coil domain 1b / calcoco1b
  
Possible biological names infered from orthology : calcium binding and coiled-coil domain 1 / Calcium-binding and coiled-coil domain-containing protein 1 / CALCOCO1 / Q8CGU1 / Q9P1Z2
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 2111582
Gene end: 2131280
  
Corresponding Affymetrix probe sets: Dr.24979.1.S1_at (Zebrafish Array)   NM_200121_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000005521
NCBI entrez gene - 386968     See in Manteia.
RefSeq - NM_200121
RefSeq Peptide - NP_956415
swissprot - F1RBA9
ZFIN ID - ZDB-GENE-031118-126
Ensembl - ENSDARG00000016391
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q9P1Z2ENSG00000012822Homo sapiens
 Q8CGU1ENSMUSG00000023055Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A2BGD5 / calcoco1a / calcium binding and coiled-coil domain 1a / Q9P1Z2* / Q8CGU1* / CALCOCO1* / calcium binding and coiled-coil domain 1* / Calcium-binding and coiled-coil domain-containin...ENSDARG0000003669536
tax1bp1b / Tax1 (human T-cell leukemia virus type I) binding protein 1b / Q86VP1* / Q3UKC1* / TAX1BP1* / Tax1-binding * / Tax1 binding protein 1*ENSDARG0000005685621
tax1bp1a / Tax1 (human T-cell leukemia virus type I) binding protein 1a / Q86VP1* / Q3UKC1* / TAX1BP1* / Tax1-binding * / Tax1 binding protein 1*ENSDARG0000009828819
calcoco2 / calcium binding and coiled-coil domain 2 / A2A6M5* / Q13137* / Calcium-binding and coiled-coil domain-containing protein 2 *ENSDARG0000005251515


Protein motifs (from Interpro)
Interpro ID Name
 IPR012852  Calcium binding and coiled-coil domain-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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