ENSG00000012822


Homo sapiens

Features
Gene ID: ENSG00000012822
  
Biological name :CALCOCO1
  
Synonyms : calcium binding and coiled-coil domain 1 / CALCOCO1 / Q9P1Z2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q13.13
Gene start: 53708517
Gene end: 53727745
  
Corresponding Affymetrix probe sets: 209002_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000450083
Ensembl peptide - ENSP00000456437
Ensembl peptide - ENSP00000262059
Ensembl peptide - ENSP00000397189
Ensembl peptide - ENSP00000446820
Ensembl peptide - ENSP00000447117
Ensembl peptide - ENSP00000447647
Ensembl peptide - ENSP00000448026
Ensembl peptide - ENSP00000448621
Ensembl peptide - ENSP00000449058
Ensembl peptide - ENSP00000449796
Ensembl peptide - ENSP00000449960
Ensembl peptide - ENSP00000450012
NCBI entrez gene - 57658     See in Manteia.
RefSeq - XM_017019709
RefSeq - NM_001143682
RefSeq - NM_020898
RefSeq - XM_011538601
RefSeq - XM_011538602
RefSeq - XM_011538603
RefSeq - XM_011538604
RefSeq - XM_017019707
RefSeq - XM_017019708
RefSeq Peptide - NP_001137154
RefSeq Peptide - NP_065949
swissprot - A0A024RAZ1
swissprot - F8VPN1
swissprot - F8VQE3
swissprot - F8VRQ9
swissprot - F8VUB3
swissprot - F8VWP8
swissprot - F8VXS2
swissprot - F8VZI3
swissprot - H3BRW8
swissprot - F8W0X2
swissprot - Q9P1Z2
Ensembl - ENSG00000012822
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A2BGD5ENSDARG00000036695Danio rerio
 calcoco1bENSDARG00000016391Danio rerio
 Q8CGU1ENSMUSG00000023055Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q86VP1 / TAX1BP1 / Tax1 binding protein 1ENSG0000010605223
Q13137 / CALCOCO2 / calcium binding and coiled-coil domain 2ENSG0000013643616


Protein motifs (from Interpro)
Interpro ID Name
 IPR012852  Calcium binding and coiled-coil domain-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated ISS
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007165 signal transduction ISS
 biological_processGO:0010628 positive regulation of gene expression IDA
 biological_processGO:0016055 Wnt signaling pathway IEA
 biological_processGO:0030518 intracellular steroid hormone receptor signaling pathway ISS
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IMP
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0000790 nuclear chromatin IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0001047 core promoter binding IDA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003712 transcription coregulator activity IDA
 molecular_functionGO:0003713 transcription coactivator activity ISS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008013 beta-catenin binding IPI
 molecular_functionGO:0008022 protein C-terminus binding IPI
 molecular_functionGO:0030374 nuclear receptor transcription coactivator activity IDA
 molecular_functionGO:0043565 sequence-specific DNA binding IDA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IDA
 molecular_functionGO:0070016 armadillo repeat domain binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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