ENSG00000136436


Homo sapiens

Features
Gene ID: ENSG00000136436
  
Biological name :CALCOCO2
  
Synonyms : calcium binding and coiled-coil domain 2 / CALCOCO2 / Q13137
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: q21.32
Gene start: 48830988
Gene end: 48866522
  
Corresponding Affymetrix probe sets: 1560631_at (Human Genome U133 Plus 2.0 Array)   210817_s_at (Human Genome U133 Plus 2.0 Array)   235076_at (Human Genome U133 Plus 2.0 Array)   238560_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000424352
Ensembl peptide - ENSP00000461184
Ensembl peptide - ENSP00000461083
Ensembl peptide - ENSP00000429963
Ensembl peptide - ENSP00000425692
Ensembl peptide - ENSP00000425090
Ensembl peptide - ENSP00000424889
Ensembl peptide - ENSP00000258947
Ensembl peptide - ENSP00000398523
Ensembl peptide - ENSP00000406974
Ensembl peptide - ENSP00000422697
Ensembl peptide - ENSP00000423437
Ensembl peptide - ENSP00000424083
Ensembl peptide - ENSP00000424169
NCBI entrez gene - 10241     See in Manteia.
OMIM - 604587
RefSeq - NM_001261393
RefSeq - NM_001261395
RefSeq - NM_005831
RefSeq - NM_001261391
RefSeq - NM_001261390
RefSeq Peptide - NP_001248322
RefSeq Peptide - NP_001248324
RefSeq Peptide - NP_005822
RefSeq Peptide - NP_001248319
RefSeq Peptide - NP_001248320
swissprot - Q13137
swissprot - D6RF70
swissprot - D6REB0
swissprot - D6RBI4
swissprot - D6RBF9
swissprot - H0Y9G3
swissprot - H0YBP4
swissprot - I3L493
swissprot - I3L4E1
swissprot - D6RJE7
Ensembl - ENSG00000136436
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 calcoco2ENSDARG00000052515Danio rerio
 CALCOCO2ENSGALG00000001525Gallus gallus
 A2A6M5ENSMUSG00000006056Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q86VP1 / TAX1BP1 / Tax1 binding protein 1ENSG0000010605231
Q9P1Z2 / CALCOCO1 / calcium binding and coiled-coil domain 1ENSG0000001282223


Protein motifs (from Interpro)
Interpro ID Name
 IPR012852  Calcium binding and coiled-coil domain-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0016032 viral process TAS
 biological_processGO:0034341 response to interferon-gamma IDA
 biological_processGO:0098792 xenophagy IMP
 biological_processGO:1901098 positive regulation of autophagosome maturation IMP
 cellular_componentGO:0000421 autophagosome membrane IEA
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005776 autophagosome IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042803 protein homodimerization activity IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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