ENSDARG00000016548


Danio rerio

Features
Gene ID: ENSDARG00000016548
  
Biological name :eif5b
  
Synonyms : eif5b / eukaryotic translation initiation factor 5B
  
Possible biological names infered from orthology : O60841 / Q05D44
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 45925150
Gene end: 45959721
  
Corresponding Affymetrix probe sets: Dr.25424.1.A1_at (Zebrafish Array)   Dr.25723.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000069175
Ensembl peptide - ENSDARP00000121092
swissprot - F1QB47
swissprot - F1R7P2
ZFIN ID - ZDB-GENE-050208-20
Ensembl - ENSDARG00000016548
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EIF5BENSGALG00000016764Gallus gallus
 EIF5BENSG00000158417Homo sapiens
 Eif5bENSMUSG00000026083Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000795  Transcription factor, GTP-binding domain
 IPR004161  Translation elongation factor EFTu-like, domain 2
 IPR005225  Small GTP-binding protein domain
 IPR009000  Translation protein, beta-barrel domain superfamily
 IPR015760  Translation initiation factor IF- 2
 IPR023115  Translation initiation factor IF- 2, domain 3
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
GTP hydrolysis and joining of the 60S ribosomal subunit


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr