ENSDARG00000016656


Danio rerio

Features
Gene ID: ENSDARG00000016656
  
Biological name :mgme1
  
Synonyms : mgme1 / mitochondrial genome maintenance exonuclease 1
  
Possible biological names infered from orthology : Mus musculus mitochondrial genome maintenance exonuclease 1 (Mgme1), transcript variant 4, mRNA. / Q9BQP7 / Q9CXC3
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 33655404
Gene end: 33658885
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000006549
NCBI entrez gene - 494097     See in Manteia.
RefSeq - NM_001008640
RefSeq Peptide - NP_001008640
swissprot - B8A4D5
ZFIN ID - ZDB-GENE-041212-68
Ensembl - ENSDARG00000016656
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MGME1ENSGALG00000008698Gallus gallus
 MGME1ENSG00000125871Homo sapiens
 Mgme1ENSMUSG00000027424Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011335  Restriction endonuclease type II-like
 IPR011604  Exonuclease, phage-type/RecB, C-terminal
 IPR026970  Mitochondrial genome maintenance exonuclease 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000002 mitochondrial genome maintenance IEA
 biological_processGO:0006264 mitochondrial DNA replication IBA
 biological_processGO:0043504 mitochondrial DNA repair IEA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 cellular_componentGO:0005739 mitochondrion IBA
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0004527 exonuclease activity IEA
 molecular_functionGO:0008297 single-stranded DNA exodeoxyribonuclease activity IBA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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