ENSDARG00000016815


Danio rerio

Features
Gene ID: ENSDARG00000016815
  
Biological name :casc1
  
Synonyms : cancer susceptibility candidate 1 / casc1
  
Possible biological names infered from orthology : cancer susceptibility 1 / Q6TDU7
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 17245001
Gene end: 17251758
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000012780
Ensembl peptide - ENSDARP00000104413
Ensembl peptide - ENSDARP00000150346
NCBI entrez gene - 566485     See in Manteia.
RefSeq - NM_001099454
RefSeq Peptide - NP_001092924
swissprot - F1R213
swissprot - T1ECS4
ZFIN ID - ZDB-GENE-041210-153
Ensembl - ENSDARG00000016815
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000014030Gallus gallus
 CASC1ENSG00000118307Homo sapiens
 Casc1ENSMUSG00000043541Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR022110  Casc1 domain
 IPR023247  Cancer susceptibility candidate protein 1
 IPR031826  Cancer susceptibility candidate 1, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr