ENSMUSG00000043541


Mus musculus

Features
Gene ID: ENSMUSG00000043541
  
Biological name :Casc1
  
Synonyms : cancer susceptibility 1 / Casc1
  
Possible biological names infered from orthology : Q6TDU7
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: G3
Gene start: 145174834
Gene end: 145211005
  
Corresponding Affymetrix probe sets: 10549237 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000107357
Ensembl peptide - ENSMUSP00000144783
Ensembl peptide - ENSMUSP00000062279
NCBI entrez gene - 320662     See in Manteia.
MGI - MGI:2444480
RefSeq - XM_017321646
RefSeq - XM_011241592
RefSeq - XM_011241593
RefSeq - XM_011241594
RefSeq - XM_017321645
RefSeq - NM_177222
RefSeq - XM_006506970
RefSeq - XM_006506971
RefSeq - XM_006506972
RefSeq - XM_006506973
RefSeq - XM_006506974
RefSeq - XM_011241588
RefSeq - XM_011241589
RefSeq - XM_011241590
RefSeq - XM_011241591
RefSeq Peptide - NP_796196
swissprot - A0A0R4J1G3
swissprot - A0A0R4J0S9
swissprot - A0A0N4SUQ9
Ensembl - ENSMUSG00000043541
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 casc1ENSDARG00000016815Danio rerio
 ENSGALG00000014030Gallus gallus
 CASC1ENSG00000118307Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR023247  Cancer susceptibility candidate protein 1
 IPR031826  Cancer susceptibility candidate 1, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002027 lung adenocarcinoma "malignant neoplasm of epithelial cells in the lung" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:18542]
Show

Allelic Composition: Mc1re/Mc1re
Genetic Background: C57BL/6

Allelic Composition: Casc1Gt(VICTR21)709Lex/Casc1+
Genetic Background: involves: 129S5/SvEvBrd

 MP:0002048 lung adenoma "benign epithelial neoplasm of the lung" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:57631]
Show

Allelic Composition: Mc1re/Mc1re
Genetic Background: C57BL/6

 MP:0004499 increased incidence of chemically-induced tumors "higher than normal frequency of tumor incidence induced by one or more chemical carcinogens or mutagens" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Mc1re/Mc1re
Genetic Background: C57BL/6

Allelic Composition: Casc1Gt(VICTR21)709Lex/Casc1+
Genetic Background: involves: 129S5/SvEvBrd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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