ENSDARG00000016889


Danio rerio

Features
Gene ID: ENSDARG00000016889
  
Biological name :eif3g
  
Synonyms : eif3g / eukaryotic translation initiation factor 3, subunit G / Q6DRC4
  
Possible biological names infered from orthology : O75821 / Q9Z1D1
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 54581987
Gene end: 54589823
  
Corresponding Affymetrix probe sets: Dr.161.1.S1_at (Zebrafish Array)   NM_200999_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000027672
NCBI entrez gene - 393974     See in Manteia.
RefSeq - NM_200999
RefSeq Peptide - NP_957293
swissprot - Q6DRC4
ZFIN ID - ZDB-GENE-040426-1076
Ensembl - ENSDARG00000016889
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EIF3GENSG00000130811Homo sapiens
 Eif3gENSMUSG00000070319Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR017334  Eukaryotic translation initiation factor 3 subunit G
 IPR024675  Eukaryotic translation initiation factor 3 subunit G, N-terminal
 IPR034240  eIF3G, RNA recognition motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005852 eukaryotic translation initiation factor 3 complex IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003743 translation initiation factor activity IBA


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000084 yolk yolk circular , abnormal
yolk grey , abnormal
yolk quality , abnormal
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 ZFA:0000106 extension extension decreased thickness , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000114 heart heart quality , abnormal
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 ZFA:0001094 whole organism whole organism viability , abnormal
whole organism decreased pigmentation , abnormal
whole organism shape , abnormal
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 ZFA:0001114 head head decreased size , abnormal
head necrotic , abnormal
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 ZFA:0001115 trunk trunk decreased thickness , abnormal
trunk atrophied , abnormal
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 ZFA:0001439 anatomical system anatomical system quality , abnormal
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 ZFA:0009090 pigment cell pigment cell quality , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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