ENSDARG00000017126


Danio rerio

Features
Gene ID: ENSDARG00000017126
  
Biological name :ilvbl
  
Synonyms : ilvB (bacterial acetolactate synthase)-like / ilvbl / Q6NV04
  
Possible biological names infered from orthology : A1L0T0 / ilvB acetolactate synthase like / Mus musculus ilvB (bacterial acetolactate synthase)-like (Ilvbl), transcript variant 4, mRNA. / Q8BU33
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 44768829
Gene end: 44794015
  
Corresponding Affymetrix probe sets: Dr.12240.1.A1_a_at (Zebrafish Array)   Dr.12240.1.A1_x_at (Zebrafish Array)   Dr.12240.2.A1_at (Zebrafish Array)   Dr.12240.2.A1_x_at (Zebrafish Array)   NM_200666_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000004404
Ensembl peptide - ENSDARP00000116380
Ensembl peptide - ENSDARP00000143612
NCBI entrez gene - 393639     See in Manteia.
RefSeq - NM_200666
RefSeq Peptide - NP_956960
swissprot - F1R263
swissprot - Q6NV04
ZFIN ID - ZDB-GENE-040426-1623
Ensembl - ENSDARG00000017126
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ILVBLENSG00000105135Homo sapiens
 IlvblENSMUSG00000032763Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hacl1 / 2-hydroxyacyl-CoA lyase 1 / Q9QXE0* / Q9UJ83*ENSDARG0000002052922


Protein motifs (from Interpro)
Interpro ID Name
 IPR000399  TPP-binding enzyme, conserved site
 IPR011766  Thiamine pyrophosphate enzyme, C-terminal TPP-binding
 IPR012000  Thiamine pyrophosphate enzyme, central domain
 IPR012001  Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
 IPR029035  DHS-like NAD/FAD-binding domain superfamily
 IPR029061  Thiamin diphosphate-binding fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048701 embryonic cranial skeleton morphogenesis IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000287 magnesium ion binding IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0030976 thiamine pyrophosphate binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism decreased size , abnormal
whole organism apoptotic , abnormal
whole organism anatomical axis decreased length , abnormal
Show

 ZFA:0001114 head head malformed , abnormal
head edematous , abnormal
Show

 ZFA:0001115 trunk trunk absent , abnormal
trunk malformed , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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