ENSDARG00000017251


Danio rerio

Features
Gene ID: ENSDARG00000017251
  
Biological name :smtlb
  
Synonyms : smtlb / somatolactin beta
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 39314578
Gene end: 39321367
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000105359
NCBI entrez gene - 553408     See in Manteia.
RefSeq - NM_001037674
RefSeq Peptide - NP_001032763
swissprot - F1QP70
ZFIN ID - ZDB-GENE-060123-1
Ensembl - ENSDARG00000017251
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
smtla / somatolactin alphaENSDARG0000003819144
gh1 / growth hormone 1 / Gh* / GH2* / CSH2* / CSH1* / CSHL1* / P01242* / Q14406* / P0DML3* / P0DML2* / P01241* / P06880* / Somatotropin * / growth hormone 2* / chorionic somatomammotropin h...ENSDARG0000003818520


Protein motifs (from Interpro)
Interpro ID Name
 IPR001400  Somatotropin/prolactin
 IPR009079  Four-helical cytokine-like, core
 IPR018116  Somatotropin hormone, conserved site
 IPR034976  Somatolactin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 biological_processGO:0043434 response to peptide hormone IDA
 biological_processGO:0051877 pigment granule aggregation in cell center IDA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005623 cell IEA
 molecular_functionGO:0005179 hormone activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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