ENSDARG00000017365


Danio rerio

Features
Gene ID: ENSDARG00000017365
  
Biological name :slc23a2
  
Synonyms : slc23a2 / solute carrier family 23 (ascorbic acid transporter), member 2
  
Possible biological names infered from orthology : Mus musculus solute carrier family 23 (nucleobase transporters), member 2 (Slc23a2), transcript variant 2, mRNA. / Q9EPR4 / Q9UGH3 / solute carrier family 23 member 2
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 42917515
Gene end: 42986689
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000142278
Ensembl peptide - ENSDARP00000154932
NCBI entrez gene - 100321249     See in Manteia.
swissprot - A0A140LG99
ZFIN ID - ZDB-GENE-090521-3
Ensembl - ENSDARG00000017365
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC23A2ENSGALG00000000195Gallus gallus
 Q9UGH3ENSG00000089057Homo sapiens
 Q9EPR4ENSMUSG00000027340Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc23a1 / solute carrier family 23 (ascorbic acid transporter), member 1 / Q9UHI7* / Q9Z2J0* / solute carrier family 23 member 1*ENSDARG0000001503357
si:dkey-106n21.1ENSDARG0000004579243
zgc:110789 / Slc23a4*ENSDARG0000005249742
slc23a3 / solute carrier family 23, member 3 / Q6PIS1*ENSDARG0000008889112


Protein motifs (from Interpro)
Interpro ID Name
 IPR006042  Xanthine/uracil permease
 IPR006043  Xanthine/uracil/vitamin C permease
 IPR029956  Solute carrier family 23 member 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015882 L-ascorbic acid transmembrane transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005215 transporter activity IEA
 molecular_functionGO:0022857 transmembrane transporter activity IEA
 molecular_functionGO:0070890 sodium-dependent L-ascorbate transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
Vitamin C (ascorbate) metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr