ENSDARG00000017367


Danio rerio

Features
Gene ID: ENSDARG00000017367
  
Biological name :rhbdf1b
  
Synonyms : rhbdf1b / rhomboid 5 homolog 1b (Drosophila)
  
Possible biological names infered from orthology : Q6PIX5 / Q96CC6 / RHBDF1 / rhomboid 5 homolog 1
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 20227395
Gene end: 20303438
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000127302
NCBI entrez gene - 563403     See in Manteia.
swissprot - E7F9C6
ZFIN ID - ZDB-GENE-130531-6
Ensembl - ENSDARG00000017367
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RHBDF1ENSGALG00000007434Gallus gallus
 Q96CC6ENSG00000007384Homo sapiens
 Q6PIX5ENSMUSG00000020282Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6GMF8 / rhbdf1a / rhomboid 5 homolog 1a (Drosophila) / RHBDF1* / Q96CC6* / rhomboid 5 homolog 1*ENSDARG0000003654180


Protein motifs (from Interpro)
Interpro ID Name
 IPR002610  Peptidase S54, rhomboid
 IPR022241  Rhomboid serine protease
 IPR022764  Peptidase S54, rhomboid domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004252 serine-type endopeptidase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr