ENSDARG00000017445


Danio rerio

Features
Gene ID: ENSDARG00000017445
  
Biological name :eif3i
  
Synonyms : eif3i / eukaryotic translation initiation factor 3, subunit I / Q7ZV55
  
Possible biological names infered from orthology : Q13347 / Q9QZD9
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 29822500
Gene end: 29832876
  
Corresponding Affymetrix probe sets: Dr.895.1.S1_at (Zebrafish Array)   NM_212990_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000017792
NCBI entrez gene - 406263     See in Manteia.
RefSeq - NM_212990
RefSeq Peptide - NP_998155
swissprot - Q7ZV55
ZFIN ID - ZDB-GENE-040426-1922
Ensembl - ENSDARG00000017445
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EIF3IENSGALG00000003337Gallus gallus
 EIF3IENSG00000084623Homo sapiens
 Eif3iENSMUSG00000028798Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
strap / serine/threonine kinase receptor associated protein / Q9Y3F4* / Q9Z1Z2*ENSDARG0000000740523


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR027525  Eukaryotic translation initiation factor 3 subunit I


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001889 liver development IMP
 biological_processGO:0002040 sprouting angiogenesis IMP
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005852 eukaryotic translation initiation factor 3 complex ISS
 molecular_functionGO:0003743 translation initiation factor activity ISS


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism decreased size , abnormal
whole organism decreased pigmentation , abnormal
whole organism cell decreased amount , abnormal
Show

 ZFA:0001285 intersegmental vessel intersegmental vessel malformed , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr