ENSDARG00000017658


Danio rerio

Features
Gene ID: ENSDARG00000017658
  
Biological name :gmppb
  
Synonyms : GDP-mannose pyrophosphorylase B / gmppb
  
Possible biological names infered from orthology : Q8BTZ7 / Q9Y5P6
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 39084107
Gene end: 39097217
  
Corresponding Affymetrix probe sets: Dr.24292.2.S1_at (Zebrafish Array)   NM_001003491_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000022618
Ensembl peptide - ENSDARP00000149007
NCBI entrez gene - 445097     See in Manteia.
RefSeq - NM_001003491
RefSeq Peptide - NP_001003491
swissprot - F1R683
ZFIN ID - ZDB-GENE-040801-234
Ensembl - ENSDARG00000017658
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GMPPBENSGALG00000002500Gallus gallus
 GMPPBENSG00000173540Homo sapiens
 GmppbENSMUSG00000070284Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gmppab / GDP-mannose pyrophosphorylase Ab / GMPPA* / Q922H4* / Q96IJ6* / GDP-mannose pyrophosphorylase A*ENSDARG0000002349836
gmppaa / Q6GMK8 / GDP-mannose pyrophosphorylase Aa / GMPPA* / Q96IJ6* / GDP-mannose pyrophosphorylase A*ENSDARG0000002411236


Protein motifs (from Interpro)
Interpro ID Name
 IPR001451  Hexapeptide repeat
 IPR005835  Nucleotidyl transferase domain
 IPR018357  Hexapeptide transferase, conserved site
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009058 biosynthetic process IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016779 nucleotidyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0001089 myoseptum myoseptum increased width , abnormal
myoseptum damaged , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased length , abnormal
whole organism decreased pigmentation , abnormal
whole organism decreased mobility , abnormal
Show

 ZFA:0001117 post-vent region post-vent region bent , abnormal
Show

 ZFA:0005145 muscle muscle sarcolemma damaged , abnormal
Show

 ZFA:0009115 skeletal muscle cell skeletal muscle cell disorganized , abnormal
skeletal muscle cell sparse , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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