ENSDARG00000023498


Danio rerio

Features
Gene ID: ENSDARG00000023498
  
Biological name :gmppab
  
Synonyms : GDP-mannose pyrophosphorylase Ab / gmppab
  
Possible biological names infered from orthology : GDP-mannose pyrophosphorylase A / GMPPA / Q922H4 / Q96IJ6
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 13506841
Gene end: 13514230
  
Corresponding Affymetrix probe sets: Dr.16874.1.S1_at (Zebrafish Array)   NM_200497_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000032669
NCBI entrez gene - 393469     See in Manteia.
RefSeq - NM_200497
RefSeq Peptide - NP_956791
swissprot - F1QZ78
ZFIN ID - ZDB-GENE-040426-1550
Ensembl - ENSDARG00000023498
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000002417Gallus gallus
 GMPPAENSG00000144591Homo sapiens
 GmppaENSMUSG00000033021Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gmppaa / Q6GMK8 / GDP-mannose pyrophosphorylase Aa / GMPPA* / Q96IJ6* / GDP-mannose pyrophosphorylase A*ENSDARG0000002411284
gmppb / GDP-mannose pyrophosphorylase B / Q8BTZ7* / Q9Y5P6*ENSDARG0000001765831


Protein motifs (from Interpro)
Interpro ID Name
 IPR001451  Hexapeptide repeat
 IPR005835  Nucleotidyl transferase domain
 IPR018357  Hexapeptide transferase, conserved site
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009058 biosynthetic process IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016779 nucleotidyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr