ENSG00000144591


Homo sapiens

Features
Gene ID: ENSG00000144591
  
Biological name :GMPPA
  
Synonyms : GDP-mannose pyrophosphorylase A / GMPPA / Q96IJ6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: q35
Gene start: 219498867
Gene end: 219506989
  
Corresponding Affymetrix probe sets: 218070_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000363027
Ensembl peptide - ENSP00000363016
Ensembl peptide - ENSP00000392465
Ensembl peptide - ENSP00000489451
Ensembl peptide - ENSP00000478700
Ensembl peptide - ENSP00000411060
Ensembl peptide - ENSP00000396750
Ensembl peptide - ENSP00000315925
Ensembl peptide - ENSP00000340760
Ensembl peptide - ENSP00000350949
NCBI entrez gene - 29926     See in Manteia.
OMIM - 615495
RefSeq - XM_017003917
RefSeq - XM_017003908
RefSeq - XM_017003909
RefSeq - XM_017003910
RefSeq - XM_017003911
RefSeq - XM_017003912
RefSeq - XM_017003913
RefSeq - XM_017003914
RefSeq - XM_017003915
RefSeq - XM_017003916
RefSeq - NM_013335
RefSeq - NM_205847
RefSeq - XM_005246483
RefSeq - XM_005246486
RefSeq - XM_011511032
RefSeq - XM_017003906
RefSeq - XM_017003907
RefSeq Peptide - NP_037467
RefSeq Peptide - NP_995319
swissprot - A0A0U1RRC2
swissprot - A0A087WUI8
swissprot - C9JAH0
swissprot - Q96IJ6
swissprot - A0A024R482
swissprot - F8WD54
swissprot - C9J255
Ensembl - ENSG00000144591
  
Related genetic diseases (OMIM): 615510 - Alacrima, achalasia, and mental retardation syndrome, 615510
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gmppaaENSDARG00000024112Danio rerio
 gmppabENSDARG00000023498Danio rerio
 ENSGALG00000002417Gallus gallus
 GmppaENSMUSG00000033021Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GMPPB / Q9Y5P6 / GDP-mannose pyrophosphorylase BENSG0000017354031


Protein motifs (from Interpro)
Interpro ID Name
 IPR001451  Hexapeptide repeat
 IPR005835  Nucleotidyl transferase domain
 IPR011004  Trimeric LpxA-like superfamily
 IPR018357  Hexapeptide transferase, conserved site
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009058 biosynthetic process IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016779 nucleotidyltransferase activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of GDP-mannose


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
Show

 HP:0000365 Hearing loss 
Show

 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
Show

 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
Show

 HP:0000505 Impaired vision 
Show

 HP:0000522 Alacrima 
Show

 HP:0000612 Iris coloboma "A `coloboma` (HP:0000589) of the `iris` (FMA:58235)." [HPO:probinson]
Show

 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
Show

 HP:0000648 Optic atrophy 
Show

 HP:0000830 Hypopituitarism "A condition of reduced function of the pituitary gland characterized by decreased secretion of one or more of the eight pituitary hormones." [HPO:curators]
Show

 HP:0000846 Adrenal insufficiency 
Show

 HP:0000962 Hyperkeratosis "Hyperkeratosis is thickening of the outer layer of the skin, the stratum corneum, which is composed of large, polyhedral, plate-like envelopes filled with keratin which are the dead cells that have migrated up from the stratum granulosum." [HPO:curators]
Show

 HP:0000966 Hypohidrosis "Abnormally diminished capacity to sweat." [HPO:curators]
Show

 HP:0000982 Palmoplantar keratoderma 
Show

 HP:0001249 Mental retardation 
Show

 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
Show

 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
Show

 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
Show

 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
Show

 HP:0001278 Orthostatic hypotension "A form of hypotension characterized by a sudden fall in blood pressure that occurs when a person assumes a standing position." [HPO:curators]
Show

 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
Show

 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
Show

 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
Show

 HP:0001611 Nasal speech 
Show

 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
Show

 HP:0002093 Respiratory insufficiency 
Show

 HP:0002376 Developmental regression 
Show

 HP:0002459 Dysautonomia 
Show

 HP:0002571 Achalasia 
Show

 HP:0003474 Sensory impairment 
Show

 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
Show

 HP:0007440 Generalized hyperpigmentation 
Show

 HP:0009916 Anisocoria "Anisocoria, or unequal pupil size, may represent a benign physiologic variant or a manifestation of disease. Pathologic anisocoria can reflect an abnormality of the musculature of the iris or of the sympathetic or prasympathetic innervation of the iris." [HPO:curators]
Show

 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr