ENSDARG00000017794


Danio rerio

Features
Gene ID: ENSDARG00000017794
  
Biological name :sdr16c5b
  
Synonyms : sdr16c5b / short chain dehydrogenase/reductase family 16C, member 5b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 58699718
Gene end: 58718472
  
Corresponding Affymetrix probe sets: Dr.26431.1.A1_at (Zebrafish Array)   NM_214771_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000112820
Ensembl peptide - ENSDARP00000049263
NCBI entrez gene - 406799     See in Manteia.
RefSeq - NM_214771
RefSeq Peptide - NP_999936
swissprot - E9QDU8
swissprot - Q7SZ49
ZFIN ID - ZDB-GENE-040426-2861
Ensembl - ENSDARG00000017794
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000022827Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sdr16c5a / short chain dehydrogenase/reductase family 16C, member 5a / Q05A13* / Q7TQA3* / Q8N3Y7* / SDR16C5* / Sdr16c6* / Epidermal retinol dehydrogenase 2 * / short chain dehydrogenase/re...ENSDARG0000001623369
si:dkey-221h15.4 / Q7TQA3* / Q05A13* / Q8N3Y7* / Sdr16c6* / SDR16C5* / Epidermal retinol dehydrogenase 2 * / short chain dehydrogenase/reductase family 16C member 5* / Short-chain dehydroge...ENSDARG0000004187350
rdh20 / retinol dehydrogenase 20ENSDARG0000002886245
rdh10b / Q7T2D1 / retinol dehydrogenase 10b / RDH10* / Q8VCH7* / Q8IZV5* / retinol dehydrogenase 10*ENSDARG0000001236945
rdh10a / retinol dehydrogenase 10a / RDH10* / Q8VCH7* / Q8IZV5* / retinol dehydrogenase 10*ENSDARG0000005873042
dhrs3b / dehydrogenase/reductase (SDR family) member 3b / DHRS3* / O88876* / O75911* / dehydrogenase/reductase 3* / Short-chain dehydrogenase/reductase 3 *ENSDARG0000004480338
dhrs3a / dehydrogenase/reductase (SDR family) member 3a / DHRS3* / O88876* / O75911* / dehydrogenase/reductase 3* / Short-chain dehydrogenase/reductase 3 *ENSDARG0000004498238


Protein motifs (from Interpro)
Interpro ID Name
 IPR002347  Short-chain dehydrogenase/reductase SDR
 IPR016040  NAD(P)-binding domain
 IPR020904  Short-chain dehydrogenase/reductase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055114 oxidation-reduction process IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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