ENSDARG00000044982


Danio rerio

Features
Gene ID: ENSDARG00000044982
  
Biological name :dhrs3a
  
Synonyms : dehydrogenase/reductase (SDR family) member 3a / dhrs3a
  
Possible biological names infered from orthology : dehydrogenase/reductase 3 / DHRS3 / O75911 / O88876 / Short-chain dehydrogenase/reductase 3
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 21663631
Gene end: 21674679
  
Corresponding Affymetrix probe sets: Dr.2644.1.A1_at (Zebrafish Array)   NM_001003477_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000066124
NCBI entrez gene - 445083     See in Manteia.
RefSeq - NM_001003477
RefSeq Peptide - NP_001003477
swissprot - Q6DBS5
ZFIN ID - ZDB-GENE-040801-217
Ensembl - ENSDARG00000044982
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DHRS3ENSGALG00000030376Gallus gallus
 DHRS3ENSG00000162496Homo sapiens
 Dhrs3ENSMUSG00000066026Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dhrs3b / dehydrogenase/reductase (SDR family) member 3b / DHRS3* / O88876* / O75911* / dehydrogenase/reductase 3* / Short-chain dehydrogenase/reductase 3 *ENSDARG0000004480383
sdr16c5b / short chain dehydrogenase/reductase family 16C, member 5bENSDARG0000001779439
sdr16c5a / short chain dehydrogenase/reductase family 16C, member 5a / Q05A13* / Q7TQA3* / Q8N3Y7* / SDR16C5* / Sdr16c6* / Epidermal retinol dehydrogenase 2 * / short chain dehydrogenase/re...ENSDARG0000001623338
rdh10b / Q7T2D1 / retinol dehydrogenase 10b / RDH10* / Q8VCH7* / Q8IZV5* / retinol dehydrogenase 10*ENSDARG0000001236936
rdh20 / retinol dehydrogenase 20ENSDARG0000002886236
rdh10a / retinol dehydrogenase 10a / RDH10* / Q8VCH7* / Q8IZV5* / retinol dehydrogenase 10*ENSDARG0000005873035
si:dkey-221h15.4 / Q7TQA3* / Q05A13* / Q8N3Y7* / Sdr16c6* / SDR16C5* / Epidermal retinol dehydrogenase 2 * / short chain dehydrogenase/reductase family 16C member 5* / Short-chain dehydroge...ENSDARG0000004187334


Protein motifs (from Interpro)
Interpro ID Name
 IPR002347  Short-chain dehydrogenase/reductase SDR
 IPR016040  NAD(P)-binding domain
 IPR032969  Short-chain dehydrogenase/reductase 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042572 retinol metabolic process IEA
 biological_processGO:0048385 regulation of retinoic acid receptor signaling pathway IMP
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0004745 retinol dehydrogenase activity IEA


Pathways (from Reactome)
Pathway description
The retinoid cycle in cones (daylight vision)
RA biosynthesis pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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