ENSDARG00000018065


Danio rerio

Features
Gene ID: ENSDARG00000018065
  
Biological name :ntm
  
Synonyms : neurotrimin / ntm
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 29963518
Gene end: 30589172
  
Corresponding Affymetrix probe sets: DrAffx.1.24.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000006040
Ensembl peptide - ENSDARP00000149816
Ensembl peptide - ENSDARP00000100022
Ensembl peptide - ENSDARP00000090736
NCBI entrez gene - 678534     See in Manteia.
swissprot - E7FH58
swissprot - E7F9I8
swissprot - B7ZV58
swissprot - F1QZF9
ZFIN ID - ZDB-GENE-060421-6020
Ensembl - ENSDARG00000018065
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
opcml / opioid binding protein/cell adhesion molecule-like / NTM* / Q14982* / Q99PJ0* / Q9P121* / neurotrimin* / Mus musculus neurotrimin (Ntm), transcript variant 7, mRNA.*ENSDARG0000001300542
negr1 / neuronal growth regulator 1 / Q7Z3B1* / Q80Z24*ENSDARG0000002160738
IGLON5 / zgc:110372 / A6NGN9* / Q8HW98* / IgLON family member 5*ENSDARG0000002217637
LSAMP / limbic system-associated membrane protein / Q13449*ENSDARG0000010306923


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042802 identical protein binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr