ENSDARG00000013005


Danio rerio

Features
Gene ID: ENSDARG00000013005
  
Biological name :opcml
  
Synonyms : opcml / opioid binding protein/cell adhesion molecule-like
  
Possible biological names infered from orthology : Mus musculus neurotrimin (Ntm), transcript variant 7, mRNA. / neurotrimin / NTM / Q14982 / Q99PJ0 / Q9P121
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 30617826
Gene end: 30785501
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000013509
NCBI entrez gene - 449538     See in Manteia.
RefSeq - NM_001005580
RefSeq Peptide - NP_001005580
swissprot - F1R350
ZFIN ID - ZDB-GENE-040927-3
Ensembl - ENSDARG00000013005
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NTMENSGALG00000001437Gallus gallus
 OPCMLENSGALG00000001442Gallus gallus
 NTMENSG00000182667Homo sapiens
 OPCMLENSG00000183715Homo sapiens
 NtmENSMUSG00000059974Mus musculus
 OpcmlENSMUSG00000062257Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ntm / neurotriminENSDARG0000001806546
IGLON5 / zgc:110372 / A6NGN9* / Q8HW98* / IgLON family member 5*ENSDARG0000002217642
negr1 / neuronal growth regulator 1 / Q7Z3B1* / Q80Z24*ENSDARG0000002160741
LSAMP / limbic system-associated membrane protein / Q13449*ENSDARG0000010306926


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr