ENSMUSG00000059974


Mus musculus

Features
Gene ID: ENSMUSG00000059974
  
Biological name :Ntm
  
Synonyms : Mus musculus neurotrimin (Ntm), transcript variant 7, mRNA. / Ntm / Q99PJ0
  
Possible biological names infered from orthology : neurotrimin / Q9P121
  
Species: Mus musculus
  
Chr. number: 9
Strand: -1
Band: A4
Gene start: 28994750
Gene end: 29963141
  
Corresponding Affymetrix probe sets: 10591978 (MoGene1.0st)   1426282_at (Mouse Genome 430 2.0 Array)   1426283_at (Mouse Genome 430 2.0 Array)   1458492_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000110891
Ensembl peptide - ENSMUSP00000114810
Ensembl peptide - ENSMUSP00000119030
Ensembl peptide - ENSMUSP00000074578
Ensembl peptide - ENSMUSP00000110892
NCBI entrez gene - 235106     See in Manteia.
MGI - MGI:2446259
RefSeq - XM_017313306
RefSeq - XM_006510205
RefSeq - XM_006510206
RefSeq - XM_006510207
RefSeq - XM_006510208
RefSeq - XM_006510209
RefSeq - XM_006510211
RefSeq - XM_017313304
RefSeq - XM_017313305
RefSeq - NM_001357603
RefSeq - NM_172290
RefSeq Peptide - NP_001344532
RefSeq Peptide - NP_758494
RefSeq Peptide - NP_001344531
swissprot - D3Z396
swissprot - F6Z2M6
swissprot - Q8BG33
swissprot - F6RQ26
swissprot - Q99PJ0
Ensembl - ENSMUSG00000059974
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 opcmlENSDARG00000013005Danio rerio
 NTMENSGALG00000001437Gallus gallus
 NTMENSG00000182667Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Opcml / opioid binding protein/cell adhesion molecule-like / Q14982*ENSMUSG0000006225771
Lsamp / Q8BLK3 / Mus musculus limbic system-associated membrane protein (Lsamp), transcript variant 2, mRNA. / Q13449* / limbic system-associated membrane protein*ENSMUSG0000006108048
Iglon5 / Q8HW98 / IgLON family member 5 / A6NGN9*ENSMUSG0000001336746
Negr1 / Q80Z24 / neuronal growth regulator 1 / Q7Z3B1*ENSMUSG0000004003746


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031225 anchored component of membrane IEA


Pathways (from Reactome)
Pathway description
Post-translational modification: synthesis of GPI-anchored proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr