ENSDARG00000018272


Danio rerio

Features
Gene ID: ENSDARG00000018272
  
Biological name :wdr33
  
Synonyms : wdr33 / WD repeat domain 33
  
Possible biological names infered from orthology : Q8K4P0 / Q9C0J8
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 5410432
Gene end: 5443745
  
Corresponding Affymetrix probe sets: Dr.12330.1.A1_at (Zebrafish Array)   NM_001024221_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000127258
Ensembl peptide - ENSDARP00000027484
Ensembl peptide - ENSDARP00000115996
NCBI entrez gene - 449009     See in Manteia.
RefSeq - NM_001024221
RefSeq - NM_001194928
RefSeq Peptide - NP_001019392
RefSeq Peptide - NP_001181857
swissprot - B8JMA9
swissprot - U3JAJ0
swissprot - F1QJZ5
ZFIN ID - ZDB-GENE-040924-3
Ensembl - ENSDARG00000018272
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 WDR33ENSGALG00000002043Gallus gallus
 WDR33ENSG00000136709Homo sapiens
 Wdr33ENSMUSG00000024400Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006378 mRNA polyadenylation IBA
 biological_processGO:0006379 mRNA cleavage IBA
 cellular_componentGO:0005847 mRNA cleavage and polyadenylation specificity factor complex IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway
mRNA 3-end processing
Processing of Intronless Pre-mRNAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0000112 gut gut quality , abnormal
gut hypoplastic , abnormal
Show

 ZFA:0000114 heart heart quality , abnormal
Show

 ZFA:0000123 liver liver quality , abnormal
liver hypoplastic , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr