ENSG00000136709


Homo sapiens

Features
Gene ID: ENSG00000136709
  
Biological name :WDR33
  
Synonyms : Q9C0J8 / WDR33 / WD repeat domain 33
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: q14.3
Gene start: 127701022
Gene end: 127811187
  
Corresponding Affymetrix probe sets: 218851_s_at (Human Genome U133 Plus 2.0 Array)   222763_s_at (Human Genome U133 Plus 2.0 Array)   223146_at (Human Genome U133 Plus 2.0 Array)   223147_s_at (Human Genome U133 Plus 2.0 Array)   229141_at (Human Genome U133 Plus 2.0 Array)   229472_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000387186
Ensembl peptide - ENSP00000397547
Ensembl peptide - ENSP00000325377
Ensembl peptide - ENSP00000376730
Ensembl peptide - ENSP00000386861
NCBI entrez gene - 55339     See in Manteia.
RefSeq - XM_017004436
RefSeq - NM_001006622
RefSeq - NM_001006623
RefSeq - NM_018383
RefSeq - XM_005263697
RefSeq - XM_011511436
RefSeq - XM_017004435
RefSeq Peptide - NP_060853
RefSeq Peptide - NP_001006623
RefSeq Peptide - NP_001006624
swissprot - C9J8B4
swissprot - Q9C0J8
swissprot - B9A053
Ensembl - ENSG00000136709
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 wdr33ENSDARG00000018272Danio rerio
 WDR33ENSGALG00000002043Gallus gallus
 Wdr33ENSMUSG00000024400Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016133  Insect cysteine-rich antifreeze protein
 IPR017986  WD40-repeat-containing domain
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome TAS
 biological_processGO:0006301 postreplication repair NAS
 biological_processGO:0006369 termination of RNA polymerase II transcription TAS
 biological_processGO:0006378 mRNA polyadenylation IBA
 biological_processGO:0006379 mRNA cleavage IBA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0006406 mRNA export from nucleus TAS
 biological_processGO:0007283 spermatogenesis NAS
 biological_processGO:0031124 mRNA 3"-end processing TAS
 cellular_componentGO:0001650 fibrillar center IDA
 cellular_componentGO:0005581 collagen trimer IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005847 mRNA cleavage and polyadenylation specificity factor complex IBA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
Transport of Mature mRNA Derived from an Intronless Transcript
mRNA Splicing - Major Pathway
mRNA 3-end processing
Processing of Intronless Pre-mRNAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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