ENSDARG00000018891


Danio rerio

Features
Gene ID: ENSDARG00000018891
  
Biological name :rnaseh2a
  
Synonyms : ribonuclease H2, subunit A / rnaseh2a
  
Possible biological names infered from orthology : O75792 / Q9CWY8
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 51712869
Gene end: 51720633
  
Corresponding Affymetrix probe sets: Dr.14704.1.S1_at (Zebrafish Array)   NM_200226_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000045893
Ensembl peptide - ENSDARP00000125360
Ensembl peptide - ENSDARP00000155352
NCBI entrez gene - 393195     See in Manteia.
RefSeq - NM_200226
RefSeq Peptide - NP_956520
swissprot - H0WET2
swissprot - Q6TNR0
ZFIN ID - ZDB-GENE-040426-976
Ensembl - ENSDARG00000018891
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 O75792ENSG00000104889Homo sapiens
 Q9CWY8ENSMUSG00000052926Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001352  Ribonuclease HII/HIII
 IPR004649  Ribonuclease H2, subunit A
 IPR012337  Ribonuclease H-like superfamily
 IPR023160  Ribonuclease HII, helix-loop-helix cap domain superfamily
 IPR024567  Ribonuclease HII/HIII domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006298 mismatch repair IBA
 biological_processGO:0016070 RNA metabolic process IEA
 biological_processGO:0043137 DNA replication, removal of RNA primer IBA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 biological_processGO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEA
 cellular_componentGO:0032299 ribonuclease H2 complex IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0004519 endonuclease activity IEA
 molecular_functionGO:0004523 RNA-DNA hybrid ribonuclease activity IBA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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