ENSMUSG00000052926


Mus musculus

Features
Gene ID: ENSMUSG00000052926
  
Biological name :Rnaseh2a
  
Synonyms : Q9CWY8 / Ribonuclease H2 subunit A / Rnaseh2a
  
Possible biological names infered from orthology : O75792
  
Species: Mus musculus
  
Chr. number: 8
Strand: -1
Band: C3
Gene start: 84956610
Gene end: 84969767
  
Corresponding Affymetrix probe sets: 10580274 (MoGene1.0st)   1452725_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000118442
Ensembl peptide - ENSMUSP00000121864
Ensembl peptide - ENSMUSP00000120374
Ensembl peptide - ENSMUSP00000066769
Ensembl peptide - ENSMUSP00000105358
Ensembl peptide - ENSMUSP00000105360
Ensembl peptide - ENSMUSP00000116164
NCBI entrez gene - 69724     See in Manteia.
MGI - MGI:1916974
RefSeq - NM_027187
RefSeq - XM_011248498
RefSeq - XM_011248497
RefSeq Peptide - NP_081463
swissprot - D3Z6L4
swissprot - Q05C51
swissprot - Q9CWY8
swissprot - F6RP29
swissprot - D3YWG3
Ensembl - ENSMUSG00000052926
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rnaseh2aENSDARG00000018891Danio rerio
 O75792ENSG00000104889Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001352  Ribonuclease HII/HIII
 IPR004649  Ribonuclease H2, subunit A
 IPR012337  Ribonuclease H-like superfamily
 IPR023160  Ribonuclease HII, helix-loop-helix cap domain superfamily
 IPR024567  Ribonuclease HII/HIII domain
 IPR036397  Ribonuclease H superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006298 mismatch repair ISO
 biological_processGO:0006401 RNA catabolic process ISS
 biological_processGO:0016070 RNA metabolic process IEA
 biological_processGO:0043137 DNA replication, removal of RNA primer IBA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 biological_processGO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0032299 ribonuclease H2 complex ISO
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0004519 endonuclease activity IEA
 molecular_functionGO:0004523 RNA-DNA hybrid ribonuclease activity IBA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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